ARC Centre of Excellence for Plant Energy Biology

Pre-release edition

PTS1 predicts peroxisomal targeting, with positive scores for high likelihood, scores -9 to 0 for low likelihood ("twilight zone") and below -9 for untargeted.

Citations:

Neuberger G, Maurer-Stroh S, Eisenhaber B, Hartig A, Eisenhaber F. Motif refinement of the peroxisomal targeting signal 1 and evaluation of taxon-specific differences. J Mol Biol. May 2;328(3):567-79, 2003.

Neuberger G, Maurer-Stroh S, Eisenhaber B, Hartig A, Eisenhaber F. Prediction of peroxisomal targeting signal 1 containing proteins from amino acid sequence. J Mol Biol. May 2;328(3):581-92, 2003.

Loading

Example

Example: show PTS1 for LOC_Os02g07760.1

System Information

Transcript of last update

Took 5 seconds, 372 millis starting Thu, 26 Jul 2012 04:25:35 GMT:
Using /var/folders/75/983jwhw537q11ck7b_b0zwf80000gn/T/RiceDB/PTS1Predictor_
Using db.local/downloaded/PTS1Predictor_
Using pts1.csv Thu Jun 14 11:41:11 WST 2012
SQL data loaded
Location statistics summarised
Full-text index and stems updated