ARC Centre of Excellence for Plant Energy Biology

Pre-release edition

PredictNLS predicts targeting through nuclear localisation sequences. PredictNLS software version 1.0.18 (28 June 2011) was run locally against MSU peptide sequences. The 'score' for each prediction in Rice DB is simply a count of the experimental and putative motifs recognised.

Citations:

Cokol, M., Nair, R., and Rost, B. Finding nuclear localization signals. EMBO Rep, 1(5):411-5, 2000.

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Example

Example: show PredictNLS for LOC_Os02g07760.1

System Information

Transcript of last update

Took 8 seconds, 15 millis starting Sat, 23 Jun 2012 09:31:11 GMT:
Using /var/folders/75/983jwhw537q11ck7b_b0zwf80000gn/T/RiceDB/PredictNLSPredictor_
Using db.local/downloaded/PredictNLSPredictor_
SQL data loaded
Location statistics summarised
Full-text index and stems updated