ARC Centre of Excellence for Plant Energy Biology

Pre-release edition

Rice DB imports coding DNA sequences from Michigan State University’s Rice Genome Annotation Project (MSU RGAP including versions 5.0, 6.0, 6.1 and 7.0. The sequence comes from the International Rice Genome Sequencing Project (IRGSP, Oryza sativa ssp. japonica cultivar Nipponbare.

Usage When Searching Rice DB Usage Viewing Rice DB Results
  • N/A.
  • Flat file info pages show coding DNA sequences (CDS) from MSU.
Example: find coding DNA for LOC_Os07g18120.1
Example: find CDS for LOC_Os07g18120.1

System Information

Transcript of last update

Took 1 minute, 55 seconds, 769 millis starting Wed, 5 Sep 2012 03:23:36 GMT:
Using /var/folders/75/983jwhw537q11ck7b_b0zwf80000gn/T/RiceDB/TIGRCDS_
Using db.local/downloaded/TIGRCDS_
Importing all.5.cds.gz
Importing all.6.cds.gz
Importing all.7.cds